Settima Edizione della Giornata Toscana di Bioinformatica e Systems Biology
Venerdì 26 Ottobre 2018
Auditorium GSK Vaccines - via Fiorentina 1, Siena
8.50-9.00 |
Rendez-vous at the GSK entrance to walk together to GSK Auditorium. |
9.00-9.30 |
Registration (at GSK Vaccines Auditorium) |
9:30-9:35 |
Welcome message Riccardo Beltrami (Exploratory Data Analytics, GSK Vaccines) |
9:35-9:45 |
Opening remarks Organizing committee |
9:45-10:00 |
Individual subject response analysis of whole-blood transcriptome responses to influenza vaccination Carlo De Intinis |
10:00-10:15 |
Artifcial Intelligence for precision medicine Alessandro Terribile |
10:15-10:30 |
Predictive method for oxidative stress evaluation in a rare disease Vittoria Cicaloni |
10:30-10:45 |
Algorithms for the analysis of genomic data @UniPi Nadia Pisanti |
10:45-11:00 |
Detecting Mutations by eBWT Nicola Prezza |
11:00-11:30 |
Coffee Break |
11:30-11:45 |
Is the Natural Genetic Code "Optimal"? Ercan E Kuruoglu |
11:45-12:00 |
STRAIN: an R package for multi-locus sequence typing from whole genomesequencing data Alessandro Brozzi |
12:00-12:15 |
ddSeeker: a tool for processing Bio-Rad ddSEQ single cell RNA-seq data Dario Romagnoli |
12:15-12:30 |
EXCAVATOR2 identifes actionable copy number alterations and aneuploidy from targeted sequencing panels Romina D'Aurizio |
12:30-12:45 |
Applying predictive models to decipher rhizobacterial modifcations in common reed die-back afected populations Giovanni Bacci |
12:45-13:00 |
Characterization of extracellular vesicles protein content in Sjogren syndrome through a SWATH-MS proteomic approach Francesco Finamore |
13:00-14:00 |
Lunch |
14:00-14:15 |
The structural exploration of protein cores, surfaces and voids, and new opportunities arising from the Department of Excellence project Andrea Bernini |
14:15-14:30 |
Engineering proteins with modulated activities: a Structural Bioinformatics approach Pietro Bongini |
14:30-15:45 |
Classical and Steered molecular dynamics for studying the mechanism of action and the binding/unbinding transition of soluble Epoxide Hydrolase inhibitors Alfonso Trezza |
14:45-15:00 |
Markov State Models as a method for extracting metastable states from numerical simulations of biological systems Simone Furini |
15:00-15:15 |
Long Short Term Memories for the identifcation of helical moieties in proteins Alberto Rossi |
15:15-15:30 |
From data to dynamic models, a continuum of methods Corrado Priami |
15:30-15:45 |
Break |
15:45-17:30 |
Round table (Training and research initiatives in bioinformatics in Tuscany)
Partecipants:
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17:30-17:35 |
Closing remarks (GSK and Org. Committee) |